A summary of traditional methods for nuclei segmentation.
| Ref. | Dataset | Methods | Pre-Processing | Post-Processing |
|---|---|---|---|---|
| [27] | 20 slides of neuroblasts | Hysteresis Thresholding | Color space decomposition | Hole filling,smoothing, removalof false positives,watershed |
| [59] | 30 cutaneous H&E stainedimages | Local Region Adaptive Thresholding | Hybrid Morphological Reconstructions | Opening |
| [6] | Real and synthetic microscopicimages | Tricalss Thresholding | – | – |
| [70] | Gold Standard Dataset | Hierarchical multilevel thresholding | Color deconvolution, opening | Dilation |
| [23] | 20 leuokocyte images | Otsu’s threhsolding | Contrast stretching, histogram equalization | Closing |
| [102] | 30 cytology pleural fluidimages | Otsu’s threhsolding | Median filtering, conversion into LAB color space | Opening |
| [60] | MoNuSeg | Adaptive Thresholding | Data Driven Color Transform | Convex hull algorithm, nuclei area priors based thresholding, hole filling |
| [61] | MoNuSeg | Local Modified Adaptive Thresholding, Self supervised classification for uncertain pixels | H component extraction, Data Driven Color Transform | Convex hull algorithm, morphological operations |
| [98] | 19 H&E stained breast cancerimages | Radial Symmetry Transform, Marker Controlled Watershed | Color deconvolution, morphological filtering | Size and solidity based refinement, ellipse approximation |
| [97] | 119 H&E breast,gastrointestinal,and Feulgenprostate images | Seeded watershed based on image driven markers | Gaussian Smoothing, Morphological Operations | Morphological Operations |
| [91] | 52 DAB stained colorectal cancer images | Region growing based seeded watershed | Global and local thresholding for foreground extraction | Intensity based auto thresholding, ellipse fitting |
| [17] | Custom breast cancer H&E dataset | Skeleton model based marker controlled watershed | Color deconvolution, Otsu’s threshold ing, morphological operations | Size based false positive removal, morphological operations |
| [46] | 34 fluorescence microscopy hepatocellular carcinomaimages | Iterative marker controlled watershed | Gradient map and distance transform of binary map | – |
| [76] | 120 H&E breast cancer images | Circular Hough Transform based modified marker controlled watershed | Denoising, CLAHE, Morphological operations | – |
| [36] | H&E esophageal images | Improved active contour with growing energy | Iterative dual thresholding, ultimate erosion | – |
| [21] | 100 H&E breast cancer images | Geodesic Active Contour | Expectation- Minimization algorithm | Overlap resolution |
| [20] | 20 H&E breast cancer images | DoG filtering and thresholding followed by level set | Bilateral filtering, Gamma correction, morphological operations | – |
| [3] | MITOS dataset | Localized, Region Based Level Set | Stain normalization, color deconvolution, filtering | – |
| [78] | KMC, BreakHis datasets (breast cancer images) | Modified Chan-Vese Model using multi chan nel color data | Color normalization, color channel selection | Morphological operations, area based false positive removal |
| [45] | 25 in-vivo and in vitro breast images | Multiscale LoG filter | Graph Cuts | Graph cuts with region adjacency coloring and alpha expansions |
| [18] | 40 promyelo-cytic leukemia and 10 lung epithelial cell images | Distance Transform, Graph cuts | Maximum Likelihood Estimation | – |
| [107] | 51 H&E cervical cell images | Adaptive and localized graph cuts | Conversion to HSV, V channel extraction, linear stretching, median filtering | Morphological and gradient features, concave points, and constrained ellipse fitting to split touching cells |
| [87] | Blood smear microscopic images | K-means clustering | Median filtering, LAB color space conversion | Erosion based region growing mechanism for nucleus splitting |
| [101] | 35 pleural effusion cytology images | K-means clustering | Median filtering, CLAHE, LAB color space conversion | Distance transform based watershed, Ellipse fitting |
| [12] | Custom H&E tumor samples | K-means clustering | Feature extraction with Gabor filters | Elimination of false positives using cytological profile |
| [84] | 45 synthetic cervical cytology images | Fuzzy C means clustering with spatial shape constraint | Complement-ing, histogram based binarization | False positive removal using area and shape priors, Closing |
| Ref. | Dataset | Methods | Pre-Processing | Post-Processing |
|---|---|---|---|---|
| [ | 20 slides of neuroblasts | Hysteresis Thresholding | Color space decomposition | Hole filling,smoothing, removalof false positives,watershed |
| [ | 30 cutaneous H&E stainedimages | Local Region Adaptive Thresholding | Hybrid Morphological Reconstructions | Opening |
| [ | Real and synthetic microscopicimages | Tricalss Thresholding | – | – |
| [ | Gold Standard Dataset | Hierarchical multilevel thresholding | Color deconvolution, opening | Dilation |
| [ | 20 leuokocyte images | Otsu’s threhsolding | Contrast stretching, histogram equalization | Closing |
| [ | 30 cytology pleural fluidimages | Otsu’s threhsolding | Median filtering, conversion into LAB color space | Opening |
| [ | MoNuSeg | Adaptive Thresholding | Data Driven Color Transform | Convex hull algorithm, nuclei area priors based thresholding, hole filling |
| [ | MoNuSeg | Local Modified Adaptive Thresholding, Self supervised classification for uncertain pixels | H component extraction, Data Driven Color Transform | Convex hull algorithm, morphological operations |
| [ | 19 H&E stained breast cancerimages | Radial Symmetry Transform, Marker Controlled Watershed | Color deconvolution, morphological filtering | Size and solidity based refinement, ellipse approximation |
| [ | 119 H&E breast,gastrointestinal,and Feulgenprostate images | Seeded watershed based on image driven markers | Gaussian Smoothing, Morphological Operations | Morphological Operations |
| [ | 52 DAB stained colorectal cancer images | Region growing based seeded watershed | Global and local thresholding for foreground extraction | Intensity based auto thresholding, ellipse fitting |
| [ | Custom breast cancer H&E dataset | Skeleton model based marker controlled watershed | Color deconvolution, Otsu’s threshold ing, morphological operations | Size based false positive removal, morphological operations |
| [ | 34 fluorescence microscopy hepatocellular carcinomaimages | Iterative marker controlled watershed | Gradient map and distance transform of binary map | – |
| [ | 120 H&E breast cancer images | Circular Hough Transform based modified marker controlled watershed | Denoising, CLAHE, Morphological operations | – |
| [ | H&E esophageal images | Improved active contour with growing energy | Iterative dual thresholding, ultimate erosion | – |
| [ | 100 H&E breast cancer images | Geodesic Active Contour | Expectation- Minimization algorithm | Overlap resolution |
| [ | 20 H&E breast cancer images | DoG filtering and thresholding followed by level set | Bilateral filtering, Gamma correction, morphological operations | – |
| [ | MITOS dataset | Localized, Region Based Level Set | Stain normalization, color deconvolution, filtering | – |
| [ | KMC, BreakHis datasets (breast cancer images) | Modified Chan-Vese Model using multi chan nel color data | Color normalization, color channel selection | Morphological operations, area based false positive removal |
| [ | 25 in-vivo and in vitro breast images | Multiscale LoG filter | Graph Cuts | Graph cuts with region adjacency coloring and alpha expansions |
| [ | 40 promyelo-cytic leukemia and 10 lung epithelial cell images | Distance Transform, Graph cuts | Maximum Likelihood Estimation | – |
| [ | 51 H&E cervical cell images | Adaptive and localized graph cuts | Conversion to HSV, V channel extraction, linear stretching, median filtering | Morphological and gradient features, concave points, and constrained ellipse fitting to split touching cells |
| [ | Blood smear microscopic images | K-means clustering | Median filtering, LAB color space conversion | Erosion based region growing mechanism for nucleus splitting |
| [ | 35 pleural effusion cytology images | K-means clustering | Median filtering, CLAHE, LAB color space conversion | Distance transform based watershed, Ellipse fitting |
| [ | Custom H&E tumor samples | K-means clustering | Feature extraction with Gabor filters | Elimination of false positives using cytological profile |
| [ | 45 synthetic cervical cytology images | Fuzzy C means clustering with spatial shape constraint | Complement-ing, histogram based binarization | False positive removal using area and shape priors, Closing |
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