Table 1

Proposed taxonomy for SC biodiversity indicators

CategorySubcategoryIndicator numbers
Genes, species and populations: organism-level diversity (richness and abundance), population viability and genetic healthSpecies-level diversity: species richness, species evenness, abundance-based coverage estimators (ACE) and taxonomic distinctness1, 2, 3, 4, 5, 7, 8, 9, 10, 15, 17, 20, 34, 36, 45, 67, 68, 112, 132, 163, 164, 198, 230
Population viability and genetic diversity: genetic diversity indices, inbreeding, effective population size, genetic bottleneck events and genetic resilience23, 32, 38, 69, 70, 105, 106, 107, 114, 118, 119, 126, 127, 134, 135, 223
Rarity, endemism and threat status: rarity indices, endemism indices and the presence of threatened or endangered species13, 14, 21, 25, 29, 42, 44, 63, 64, 66, 146, 153
Habitats and ecosystems: habitat condition, ecosystem integrity and connectivity – factors that shape species distributionsHabitat condition and integrity: habitat quality, habitat integrity index, habitat suitability, structural complexity and microhabitat metrics19, 35, 40, 41, 46, 47, 62, 113, 165, 185, 188, 191, 202, 205, 207, 227, 237
Habitat area and fragmentation: habitat size, fragmentation, edge effects, patch diversity and corridor availability50, 60, 180, 215
Landscape connectivity and restoration: connectivity metrics, reforestation or regeneration success, corridor and crossing connectivity and secondary forest regeneration18, 30, 61, 182, 187, 211
Ecosystem function and resilience: addresses ecological processes, functional diversity and the ability of ecosystems to recover or resist disturbancesFunctional diversity and trophic dynamics: functional traits, redundancy, trophic level indices, trophic structure and interaction richness6, 11, 26, 27, 31, 33, 37, 43, 48, 71, 99, 155, 175, 176, 184, 193, 195, 196, 199, 210, 218, 220, 222, 225, 228, 229, 231
Resilience, stability and vulnerability: vulnerability indices, resilience indices, ecosystem tipping point risks and functional stability22, 24, 115, 125, 138, 139, 238
Ecosystem health and composite indices: ecosystem health indices, biotic indices and consensus indices12, 16, 39, 177
Ecosystem services and nature’s contributions to humans: encompasses provisioning, regulating, supporting and cultural services, plus nature-based solutionsKey ecosystem services: pollination, water purification, soil fertility, pest/disease control and carbon sequestration28, 73, 74, 75, 76, 95, 147, 169, 234, 236
Nature-based solutions and restoration: mangrove regeneration potential, rewilding progress, payment for ecosystem services and habitat buffering (e.g. coastal sediment retention)102, 140, 167, 201, 213, 217, 226, 232, 246
Cultural and biocultural values: Biocultural diversity index, cultural keystone species and local/indigenous knowledge retention149, 156, 212
Pressures: land use, resource extraction and habitat alteration: captures how human activities – especially land and resource use – drive biodiversity changeDeforestation, land-use change and intensity: deforestation rates, land use intensity, desertification pressure and farmland indicators49, 77, 101, 103, 208
Resource extraction and consumption: resource extraction intensity, habitat encroachment, resource recovery rates and SC transitions53, 78, 79, 100, 133, 141, 158, 248
Infrastructure and fragmentation drivers: roadkill/collision hotspots, microclimate variation around facilities, edge species vulnerability and river continuity score56, 142, 181, 221
Pressures: pollution, waste and chemical impacts: focuses on pollution from chemicals, plastics, waste and emissions affecting air, water and soilPollution and emissions: pollution emissions, greenhouse gas emissions, endocrine disruptors and microplastic infiltration54, 81, 145, 190
Waste generation and circularity: waste generation, hazardous waste management, single-use plastic dependency and circular material flows55, 57, 58, 59, 104, 160, 171
Soil, water and air contamination: water quality, eutrophication risk, soil enzyme activity and marine noise pollution51, 52, 159, 166, 172, 178, 186, 194, 197
Pressures: climate change and extreme events: covers climate-biodiversity interactions, phenological shifts, thermal stress and other climate-related impactsClimate-biodiversity interactions: climate-biodiversity interaction index, phenological shift tracking, climate refugee species and thermal refuge connectivity124, 144, 170, 179, 192, 200, 204, 209, 219, 224
GHG emissions and sequestration: already partly in “pollution & emissions” but cross-listed if focusing on climate72, 80
Extreme events and sensitivity: fire frequency impact score, high-altitude ecosystem sensitivity, glacial ecosystem integrity and coral bleaching risk183, 189, 206, 233, 235
Invasive species, pathogens and disease risk: encompasses non-native species, disease vectors and zoonotic risks in SCsInvasive species spread and impact: invasive species presence/coverage, economic impact, rate of spread and management effectiveness65, 108, 109, 120, 121, 129, 136, 137
Pathogens and disease: invasive pathogen index, multi-host pathogen reservoirs, zoonotic spillover risk and wildlife–livestock interface128, 214, 239, 240, 241
Human–wildlife conflict: conflict severity, coexistence strategies and predator–prey balance disruptions242, 243
Governance, policy and socioeconomic dimensions: covers stakeholder engagement, corporate oversight, regulatory compliance and equityGovernance and corporate responsibility: corporate biodiversity engagement score, biodiversity disclosure, policy alignment, regulatory compliance and international collaboration82, 83, 98, 111, 123, 143, 157, 162, 216, 244, 245, 249
Stakeholder engagement and social equity: stakeholder engagement, indigenous knowledge integration, cultural biodiversity value and biodiversity impact equity96, 110, 116, 122, 130, 131, 148, 173
Economic impacts and incentives: payment for ecosystem services, resource extraction trade-offs, local stewardship incentives and biodiversity offsets87, 97, 152, 168, 174, 247
Methodological, data and capacity-building factors: addresses data availability, standardization, monitoring techniques and communication for improved biodiversity managementData gaps, quality and standardization: data scarcity and quality, lack of standardized indicators, remote sensing indices and eDNA monitoring84, 86, 88, 90, 117
Methodological improvements: methodological limitations, integrating LCA or other environmental accounting methods and improving impact analysis85, 91, 92, 93, 150, 151, 154, 161, 203
Capacity building and communication: communication strategies, stakeholder awareness, knowledge retention and corporate training89, 94

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