Table 1 List of T-cell epitopes chosen...

Table 1

List of T-cell epitopes chosen based on C-terminal cleavage and TAP score generated from IEDB web server

Residue No	Peptide sequence	MHC binding affinity	Rescale binding affinity	c-terminal cleavage affinity	Transport affinity	Prediction score
348	WTDDLQALF	0.6653	2.8249	0.8918	2.205	3.0689
540	CTAQVVPIY	0.6273	2.6636	0.9708	2.823	2.9504
691	LSPFLYSIY	0.4345	1.845	0.9068	2.963	2.1291
1153	LTSTVDSLF	0.4378	1.859	0.7615	2.567	2.1016
455	GSSLPSTRY	0.4094	1.7381	0.9783	2.836	2.0267
122	STLLVHCVY	0.3729	1.5834	0.976	3.021	1.8809
72	TSWQQYHTY	0.3349	1.422	0.9789	3.152	1.7264
1136	SIDTSGSLF	0.3496	1.4846	0.6219	2.594	1.7075
986	HVKQSVLAY	0.308	1.3077	0.9656	3.124	1.6087
412	LSDTTATIK	0.3385	1.4372	0.7634	0.188	1.5611
688	GSILSPFLY	0.2955	1.2546	0.9313	2.806	1.5346
135	LSDLEAMDI	0.2772	1.1769	0.504	0.457	1.2753
1154	TSTVDSLFF	0.2298	0.9757	0.8372	2.566	1.2296
199	QLAYGIPTY	0.1844	0.7831	0.9758	2.984	1.0787
69	RLMTSWQQY	0.1753	0.7443	0.9546	3.301	1.0526
279	LTEPDCLYV	0.1988	0.8439	0.8911	0.285	0.9918
278	RLTEPDCLY	0.1567	0.6654	0.8945	3.206	0.9599
904	LTSTPSMHV	0.1838	0.7806	0.9159	0.27	0.9314
304	YTSPTNSTA	0.2102	0.8924	0.3864	−0.571	0.9219
586	SLDPVQGGF	0.1515	0.6431	0.9667	2.286	0.9024
310	STAPDMDLL	0.1666	0.7072	0.7322	1.144	0.8742
43	TVDQTTNSL	0.1614	0.6855	0.9705	0.844	0.8733
719	YSSNPQREF	0.1509	0.6405	0.6302	2.499	0.86
322	LTSIIHSCL	0.146	0.62	0.9543	0.766	0.8014
442	ATTMANHLK	0.1468	0.6231	0.8251	0.705	0.7821
117	LSCQVSTLL	0.137	0.5816	0.9079	1.055	0.7705
96	LLVNPHCPY	0.1067	0.4531	0.9758	3.08	0.7535
34	WNANGCNRY	0.1109	0.4708	0.9414	2.81	0.7526

Residue No	Peptide sequence	MHC binding affinity	Rescale binding affinity	c-terminal cleavage affinity	Transport affinity	Prediction score
348	WTDDLQALF	0.6653	2.8249	0.8918	2.205	3.0689
540	CTAQVVPIY	0.6273	2.6636	0.9708	2.823	2.9504
691	LSPFLYSIY	0.4345	1.845	0.9068	2.963	2.1291
1153	LTSTVDSLF	0.4378	1.859	0.7615	2.567	2.1016
455	GSSLPSTRY	0.4094	1.7381	0.9783	2.836	2.0267
122	STLLVHCVY	0.3729	1.5834	0.976	3.021	1.8809
72	TSWQQYHTY	0.3349	1.422	0.9789	3.152	1.7264
1136	SIDTSGSLF	0.3496	1.4846	0.6219	2.594	1.7075
986	HVKQSVLAY	0.308	1.3077	0.9656	3.124	1.6087
412	LSDTTATIK	0.3385	1.4372	0.7634	0.188	1.5611
688	GSILSPFLY	0.2955	1.2546	0.9313	2.806	1.5346
135	LSDLEAMDI	0.2772	1.1769	0.504	0.457	1.2753
1154	TSTVDSLFF	0.2298	0.9757	0.8372	2.566	1.2296
199	QLAYGIPTY	0.1844	0.7831	0.9758	2.984	1.0787
69	RLMTSWQQY	0.1753	0.7443	0.9546	3.301	1.0526
279	LTEPDCLYV	0.1988	0.8439	0.8911	0.285	0.9918
278	RLTEPDCLY	0.1567	0.6654	0.8945	3.206	0.9599
904	LTSTPSMHV	0.1838	0.7806	0.9159	0.27	0.9314
304	YTSPTNSTA	0.2102	0.8924	0.3864	−0.571	0.9219
586	SLDPVQGGF	0.1515	0.6431	0.9667	2.286	0.9024
310	STAPDMDLL	0.1666	0.7072	0.7322	1.144	0.8742
43	TVDQTTNSL	0.1614	0.6855	0.9705	0.844	0.8733
719	YSSNPQREF	0.1509	0.6405	0.6302	2.499	0.86
322	LTSIIHSCL	0.146	0.62	0.9543	0.766	0.8014
442	ATTMANHLK	0.1468	0.6231	0.8251	0.705	0.7821
117	LSCQVSTLL	0.137	0.5816	0.9079	1.055	0.7705
96	LLVNPHCPY	0.1067	0.4531	0.9758	3.08	0.7535
34	WNANGCNRY	0.1109	0.4708	0.9414	2.81	0.7526

Source(s): Table by authors

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